Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm11814-201ENSMUST00000119515 929 ntBASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Gm2231-201ENSMUST00000125661 612 ntBASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Gm17420-201ENSMUST00000164753 153 ntBASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vcpip1Q8CDG3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Gm13226-201ENSMUST00000117838 404 ntBASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Gm8062-201ENSMUST00000139696 444 ntBASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Gm42693-201ENSMUST00000196779 631 ntBASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Mir339-201ENSMUST00000083659 96 ntBASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Gm10478-201ENSMUST00000084451 396 ntBASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vcpip1Q8CDG3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Mir1247-201ENSMUST00000116706 82 ntBASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vcpip1Q8CDG3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms