Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Gm15703-201ENSMUST00000120250 880 ntBASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Lysmd4Q8CC84 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Lysmd4Q8CC84 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Gm14704-201ENSMUST00000120300 874 ntBASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Gm42612-201ENSMUST00000197986 623 ntBASIC11.3□□□□□ -0.6
Lysmd4Q8CC84 Gm43170-201ENSMUST00000199827 612 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms