Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa4Q8CA71 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Gm44124-201ENSMUST00000204159 472 ntBASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Gm19994-201ENSMUST00000217086 586 ntBASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa4Q8CA71 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shisa4Q8CA71 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Shisa4Q8CA71 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.58□□□□□ -0.07
Shisa4Q8CA71 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shisa4Q8CA71 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shisa4Q8CA71 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shisa4Q8CA71 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa4Q8CA71 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 B9d1os-201ENSMUST00000137010 674 ntBASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Mir5120-201ENSMUST00000175020 78 ntBASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa4Q8CA71 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms