Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SprnQ8BWU1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
SprnQ8BWU1 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.16□□□□□ -0.62
SprnQ8BWU1 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SprnQ8BWU1 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SprnQ8BWU1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SprnQ8BWU1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SprnQ8BWU1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SprnQ8BWU1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
SprnQ8BWU1 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SprnQ8BWU1 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.16□□□□□ -0.62
SprnQ8BWU1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SprnQ8BWU1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.15□□□□□ -0.62
SprnQ8BWU1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.15□□□□□ -0.62
SprnQ8BWU1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SprnQ8BWU1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.15□□□□□ -0.62
SprnQ8BWU1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
SprnQ8BWU1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SprnQ8BWU1 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.15□□□□□ -0.63
SprnQ8BWU1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
SprnQ8BWU1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
SprnQ8BWU1 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.15□□□□□ -0.63
SprnQ8BWU1 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SprnQ8BWU1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Gm13689-201ENSMUST00000119360 685 ntBASIC11.14□□□□□ -0.63
SprnQ8BWU1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.14□□□□□ -0.63
SprnQ8BWU1 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Gm28911-201ENSMUST00000188837 117 ntBASIC11.14□□□□□ -0.63
SprnQ8BWU1 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.14□□□□□ -0.63
SprnQ8BWU1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.14□□□□□ -0.63
SprnQ8BWU1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SprnQ8BWU1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SprnQ8BWU1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms