Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm12566-201ENSMUST00000121479 359 ntBASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Gm5070-201ENSMUST00000177599 862 ntBASIC13.4□□□□□ -0.26
Rd3Q8BRE0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Gm13296-201ENSMUST00000117854 997 ntBASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Gm12176-201ENSMUST00000121420 875 ntBASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.39□□□□□ -0.27
Rd3Q8BRE0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Gm13813-201ENSMUST00000120998 787 ntBASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rd3Q8BRE0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.37□□□□□ -0.27
Rd3Q8BRE0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms