Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp54Q8BL06 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC17.62■□□□□ 0.41
Usp54Q8BL06 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Gm6867-201ENSMUST00000219165 425 ntBASIC17.62■□□□□ 0.41
Usp54Q8BL06 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Gm14314-201ENSMUST00000118225 1015 ntBASIC17.62■□□□□ 0.41
Usp54Q8BL06 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Gm18159-201ENSMUST00000174516 1070 ntBASIC17.62■□□□□ 0.41
Usp54Q8BL06 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Ighv5-11-201ENSMUST00000193354 371 ntBASIC17.62■□□□□ 0.41
Usp54Q8BL06 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Usp54Q8BL06 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp54Q8BL06 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 AC154262.2-202ENSMUST00000225158 1331 ntBASIC17.61■□□□□ 0.41
Usp54Q8BL06 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Gm25076-201ENSMUST00000104098 132 ntBASIC17.61■□□□□ 0.41
Usp54Q8BL06 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Gm15004-201ENSMUST00000119192 630 ntBASIC17.61■□□□□ 0.41
Usp54Q8BL06 Gm11956-201ENSMUST00000119525 512 ntBASIC17.61■□□□□ 0.41
Usp54Q8BL06 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC17.61■□□□□ 0.41
Usp54Q8BL06 Gm16397-201ENSMUST00000122201 494 ntBASIC17.61■□□□□ 0.41
Usp54Q8BL06 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Gm29499-201ENSMUST00000189151 486 ntBASIC17.61■□□□□ 0.41
Usp54Q8BL06 Gm28329-201ENSMUST00000191208 689 ntBASIC17.61■□□□□ 0.41
Usp54Q8BL06 Gm29171-201ENSMUST00000191397 486 ntBASIC17.61■□□□□ 0.41
Usp54Q8BL06 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC17.61■□□□□ 0.41
Usp54Q8BL06 AC134860.1-201ENSMUST00000224867 660 ntBASIC17.61■□□□□ 0.41
Usp54Q8BL06 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp54Q8BL06 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Gm13328-201ENSMUST00000120816 1020 ntBASIC17.6■□□□□ 0.41
Usp54Q8BL06 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp54Q8BL06 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp54Q8BL06 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Gm7537-201ENSMUST00000221660 1414 ntBASIC17.59■□□□□ 0.41
Usp54Q8BL06 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp54Q8BL06 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms