Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ShbQ6PD21 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.48□□□□□ -0.25
ShbQ6PD21 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ShbQ6PD21 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ShbQ6PD21 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Mir671-201ENSMUST00000102432 98 ntBASIC13.47□□□□□ -0.25
ShbQ6PD21 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ShbQ6PD21 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
ShbQ6PD21 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.47□□□□□ -0.25
ShbQ6PD21 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Gm12164-201ENSMUST00000121695 551 ntBASIC13.47□□□□□ -0.25
ShbQ6PD21 Gm5257-201ENSMUST00000121823 790 ntBASIC13.47□□□□□ -0.25
ShbQ6PD21 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.47□□□□□ -0.25
ShbQ6PD21 Gm8815-201ENSMUST00000173809 620 ntBASIC13.47□□□□□ -0.25
ShbQ6PD21 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ShbQ6PD21 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Gm18204-201ENSMUST00000209835 793 ntBASIC13.47□□□□□ -0.25
ShbQ6PD21 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.47□□□□□ -0.25
ShbQ6PD21 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.47□□□□□ -0.25
ShbQ6PD21 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.47□□□□□ -0.25
ShbQ6PD21 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.47□□□□□ -0.25
ShbQ6PD21 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
ShbQ6PD21 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShbQ6PD21 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
ShbQ6PD21 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ShbQ6PD21 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ShbQ6PD21 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ShbQ6PD21 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.46□□□□□ -0.25
ShbQ6PD21 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.46□□□□□ -0.25
ShbQ6PD21 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.46□□□□□ -0.25
ShbQ6PD21 Gm24398-201ENSMUST00000157870 109 ntBASIC13.46□□□□□ -0.25
ShbQ6PD21 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
ShbQ6PD21 Gm29499-201ENSMUST00000189151 486 ntBASIC13.46□□□□□ -0.25
ShbQ6PD21 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.46□□□□□ -0.25
ShbQ6PD21 Gm28329-201ENSMUST00000191208 689 ntBASIC13.46□□□□□ -0.25
ShbQ6PD21 Gm29171-201ENSMUST00000191397 486 ntBASIC13.46□□□□□ -0.25
ShbQ6PD21 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.46□□□□□ -0.25
ShbQ6PD21 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.46□□□□□ -0.25
ShbQ6PD21 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ShbQ6PD21 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
ShbQ6PD21 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ShbQ6PD21 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShbQ6PD21 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.46□□□□□ -0.25
ShbQ6PD21 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ShbQ6PD21 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ShbQ6PD21 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ShbQ6PD21 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ShbQ6PD21 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ShbQ6PD21 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShbQ6PD21 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShbQ6PD21 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.45□□□□□ -0.26
ShbQ6PD21 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShbQ6PD21 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShbQ6PD21 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShbQ6PD21 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShbQ6PD21 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShbQ6PD21 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ShbQ6PD21 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShbQ6PD21 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShbQ6PD21 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ShbQ6PD21 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ShbQ6PD21 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms