Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Gm12969-201ENSMUST00000120199 1004 ntBASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC19.08■□□□□ 0.65
Slx4Q6P1D7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 AC165260.2-203ENSMUST00000224237 336 ntBASIC19.08■□□□□ 0.65
Slx4Q6P1D7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slx4Q6P1D7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slx4Q6P1D7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slx4Q6P1D7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slx4Q6P1D7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Slx4Q6P1D7 Gm43721-201ENSMUST00000199677 2313 ntBASIC19.08■□□□□ 0.64
Slx4Q6P1D7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Gm15566-201ENSMUST00000121130 590 ntBASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Gm8737-201ENSMUST00000122208 642 ntBASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Gm8956-201ENSMUST00000203939 825 ntBASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Gm44552-201ENSMUST00000205458 1247 ntBASIC19.07■□□□□ 0.64
Slx4Q6P1D7 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Gm9111-201ENSMUST00000219394 709 ntBASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC19.07■□□□□ 0.64
Slx4Q6P1D7 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 CT025553.1-201ENSMUST00000226292 299 ntBASIC19.06■□□□□ 0.64
Slx4Q6P1D7 AC156501.1-201ENSMUST00000228219 270 ntBASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slx4Q6P1D7 Gm38391-201ENSMUST00000191720 4069 ntBASIC19.06■□□□□ 0.64
Slx4Q6P1D7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms