Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.39□□□□□ -0.27
Scube3Q66PY1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.39□□□□□ -0.27
Scube3Q66PY1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scube3Q66PY1 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.39□□□□□ -0.27
Scube3Q66PY1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.38□□□□□ -0.27
Scube3Q66PY1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.38□□□□□ -0.27
Scube3Q66PY1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.38□□□□□ -0.27
Scube3Q66PY1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.38□□□□□ -0.27
Scube3Q66PY1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Gm43179-201ENSMUST00000198797 275 ntBASIC13.38□□□□□ -0.27
Scube3Q66PY1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Gm44548-201ENSMUST00000208929 192 ntBASIC13.38□□□□□ -0.27
Scube3Q66PY1 Gm10608-202ENSMUST00000213924 676 ntBASIC13.38□□□□□ -0.27
Scube3Q66PY1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 AC129323.1-201ENSMUST00000216733 470 ntBASIC13.38□□□□□ -0.27
Scube3Q66PY1 CT009711.2-202ENSMUST00000224538 973 ntBASIC13.38□□□□□ -0.27
Scube3Q66PY1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.38□□□□□ -0.27
Scube3Q66PY1 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scube3Q66PY1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.37□□□□□ -0.27
Scube3Q66PY1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Gm13183-201ENSMUST00000118615 789 ntBASIC13.37□□□□□ -0.27
Scube3Q66PY1 Gm13316-201ENSMUST00000140537 691 ntBASIC13.37□□□□□ -0.27
Scube3Q66PY1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Gm44146-201ENSMUST00000203508 816 ntBASIC13.37□□□□□ -0.27
Scube3Q66PY1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.37□□□□□ -0.27
Scube3Q66PY1 Gm5904-201ENSMUST00000210286 865 ntBASIC13.37□□□□□ -0.27
Scube3Q66PY1 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Gm45930-201ENSMUST00000221330 292 ntBASIC13.37□□□□□ -0.27
Scube3Q66PY1 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.37□□□□□ -0.27
Scube3Q66PY1 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.37□□□□□ -0.27
Scube3Q66PY1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scube3Q66PY1 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.37□□□□□ -0.27
Scube3Q66PY1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms