Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sdc3Q64519 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sdc3Q64519 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Sdc3Q64519 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sdc3Q64519 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.18□□□□□ -0.46
Sdc3Q64519 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.18□□□□□ -0.46
Sdc3Q64519 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.18□□□□□ -0.46
Sdc3Q64519 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Sdc3Q64519 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.18□□□□□ -0.46
Sdc3Q64519 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.18□□□□□ -0.46
Sdc3Q64519 Cts7-204ENSMUST00000225321 1257 ntBASIC12.18□□□□□ -0.46
Sdc3Q64519 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.18□□□□□ -0.46
Sdc3Q64519 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Sdc3Q64519 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.18□□□□□ -0.46
Sdc3Q64519 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.18□□□□□ -0.46
Sdc3Q64519 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sdc3Q64519 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sdc3Q64519 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.17□□□□□ -0.46
Sdc3Q64519 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Gm22121-201ENSMUST00000175148 54 ntBASIC12.17□□□□□ -0.46
Sdc3Q64519 Gm7584-201ENSMUST00000175829 940 ntBASIC12.17□□□□□ -0.46
Sdc3Q64519 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.17□□□□□ -0.46
Sdc3Q64519 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.17□□□□□ -0.46
Sdc3Q64519 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.17□□□□□ -0.46
Sdc3Q64519 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.17□□□□□ -0.46
Sdc3Q64519 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.17□□□□□ -0.46
Sdc3Q64519 Gm9368-201ENSMUST00000219348 831 ntBASIC12.17□□□□□ -0.46
Sdc3Q64519 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Sdc3Q64519 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.17□□□□□ -0.46
Sdc3Q64519 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sdc3Q64519 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sdc3Q64519 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Sdc3Q64519 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.17□□□□□ -0.46
Sdc3Q64519 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.17□□□□□ -0.46
Sdc3Q64519 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sdc3Q64519 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.16□□□□□ -0.46
Sdc3Q64519 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sdc3Q64519 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms