Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Notch3Q61982 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Notch3Q61982 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Notch3Q61982 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Notch3Q61982 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Notch3Q61982 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Notch3Q61982 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Notch3Q61982 Gm38346-201ENSMUST00000192379 2639 ntBASIC9.74□□□□□ -0.85
Notch3Q61982 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Notch3Q61982 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.73□□□□□ -0.85
Notch3Q61982 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Gm14130-201ENSMUST00000118417 987 ntBASIC9.73□□□□□ -0.85
Notch3Q61982 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.73□□□□□ -0.85
Notch3Q61982 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Notch3Q61982 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.73□□□□□ -0.85
Notch3Q61982 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.73□□□□□ -0.85
Notch3Q61982 Gm19208-201ENSMUST00000213861 912 ntBASIC9.73□□□□□ -0.85
Notch3Q61982 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC9.73□□□□□ -0.85
Notch3Q61982 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Notch3Q61982 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC9.73□□□□□ -0.85
Notch3Q61982 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Notch3Q61982 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Notch3Q61982 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Notch3Q61982 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Notch3Q61982 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC9.73□□□□□ -0.85
Notch3Q61982 Gm13570-201ENSMUST00000140763 309 ntBASIC9.73□□□□□ -0.85
Notch3Q61982 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Notch3Q61982 Mir6927-201ENSMUST00000184494 71 ntBASIC9.73□□□□□ -0.85
Notch3Q61982 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC9.73□□□□□ -0.85
Notch3Q61982 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC9.73□□□□□ -0.85
Notch3Q61982 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.73□□□□□ -0.85
Notch3Q61982 Gm18556-201ENSMUST00000219748 1031 ntBASIC9.73□□□□□ -0.85
Notch3Q61982 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Notch3Q61982 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Notch3Q61982 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Notch3Q61982 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Notch3Q61982 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Notch3Q61982 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.72□□□□□ -0.85
Notch3Q61982 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.72□□□□□ -0.85
Notch3Q61982 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Notch3Q61982 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Notch3Q61982 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Mir6979-201ENSMUST00000183927 56 ntBASIC9.72□□□□□ -0.85
Notch3Q61982 Gm37835-201ENSMUST00000193305 361 ntBASIC9.72□□□□□ -0.85
Notch3Q61982 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.72□□□□□ -0.85
Notch3Q61982 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Notch3Q61982 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 AC139054.1-201ENSMUST00000226898 1598 ntBASIC9.72□□□□□ -0.85
Notch3Q61982 AC139350.1-201ENSMUST00000227064 1594 ntBASIC9.72□□□□□ -0.85
Notch3Q61982 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.72□□□□□ -0.85
Notch3Q61982 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC9.72□□□□□ -0.85
Notch3Q61982 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms