Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ccne1Q61457 Gm43858-201ENSMUST00000199418 1778 ntBASIC16.37■□□□□ 0.21
Ccne1Q61457 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC16.37■□□□□ 0.21
Ccne1Q61457 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Gm13611-201ENSMUST00000118269 318 ntBASIC16.37■□□□□ 0.21
Ccne1Q61457 AC154680.1-201ENSMUST00000224376 859 ntBASIC16.37■□□□□ 0.21
Ccne1Q61457 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC16.37■□□□□ 0.21
Ccne1Q61457 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.37■□□□□ 0.21
Ccne1Q61457 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC16.37■□□□□ 0.21
Ccne1Q61457 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ccne1Q61457 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccne1Q61457 Retreg1-206ENSMUST00000228306 1430 ntBASIC16.36■□□□□ 0.21
Ccne1Q61457 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ccne1Q61457 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ccne1Q61457 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC16.36■□□□□ 0.21
Ccne1Q61457 Gm15515-201ENSMUST00000117827 822 ntBASIC16.36■□□□□ 0.21
Ccne1Q61457 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC16.36■□□□□ 0.21
Ccne1Q61457 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC16.36■□□□□ 0.21
Ccne1Q61457 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.36■□□□□ 0.21
Ccne1Q61457 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccne1Q61457 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.36■□□□□ 0.21
Ccne1Q61457 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccne1Q61457 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ccne1Q61457 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccne1Q61457 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccne1Q61457 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
Ccne1Q61457 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.35■□□□□ 0.21
Ccne1Q61457 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ccne1Q61457 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Ccne1Q61457 Gm11989-201ENSMUST00000117240 672 ntBASIC16.35■□□□□ 0.21
Ccne1Q61457 Gm11362-201ENSMUST00000118838 850 ntBASIC16.35■□□□□ 0.21
Ccne1Q61457 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Gm28071-201ENSMUST00000190355 478 ntBASIC16.35■□□□□ 0.21
Ccne1Q61457 Gm5369-201ENSMUST00000217499 588 ntBASIC16.35■□□□□ 0.21
Ccne1Q61457 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ccne1Q61457 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ccne1Q61457 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Ccne1Q61457 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ccne1Q61457 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ccne1Q61457 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccne1Q61457 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccne1Q61457 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccne1Q61457 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccne1Q61457 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccne1Q61457 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccne1Q61457 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccne1Q61457 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.34■□□□□ 0.21
Ccne1Q61457 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccne1Q61457 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccne1Q61457 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccne1Q61457 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Ccne1Q61457 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccne1Q61457 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccne1Q61457 Gm24934-201ENSMUST00000103764 111 ntBASIC16.34■□□□□ 0.21
Ccne1Q61457 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccne1Q61457 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccne1Q61457 Gm23119-201ENSMUST00000158610 140 ntBASIC16.34■□□□□ 0.21
Ccne1Q61457 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Ccne1Q61457 Gm9211-201ENSMUST00000182882 975 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms