Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Xrn1P97789 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrn1P97789 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrn1P97789 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Xrn1P97789 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrn1P97789 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Xrn1P97789 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Xrn1P97789 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Xrn1P97789 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC17.53■□□□□ 0.4
Xrn1P97789 Gm45643-201ENSMUST00000211364 1484 ntBASIC17.53■□□□□ 0.4
Xrn1P97789 Gm23272-201ENSMUST00000104053 129 ntBASIC17.52■□□□□ 0.4
Xrn1P97789 Gm23912-201ENSMUST00000104687 87 ntBASIC17.52■□□□□ 0.4
Xrn1P97789 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC17.52■□□□□ 0.4
Xrn1P97789 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrn1P97789 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC17.52■□□□□ 0.4
Xrn1P97789 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
Xrn1P97789 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrn1P97789 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Xrn1P97789 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrn1P97789 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC17.52■□□□□ 0.4
Xrn1P97789 Gm44260-201ENSMUST00000204946 2094 ntBASIC17.52■□□□□ 0.4
Xrn1P97789 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Xrn1P97789 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrn1P97789 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrn1P97789 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Xrn1P97789 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrn1P97789 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Xrn1P97789 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Xrn1P97789 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Xrn1P97789 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Xrn1P97789 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Xrn1P97789 Gm13047-201ENSMUST00000117116 815 ntBASIC17.52■□□□□ 0.39
Xrn1P97789 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Xrn1P97789 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC17.52■□□□□ 0.39
Xrn1P97789 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Xrn1P97789 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Xrn1P97789 Gm28324-201ENSMUST00000187913 264 ntBASIC17.52■□□□□ 0.39
Xrn1P97789 Gm44552-201ENSMUST00000205458 1247 ntBASIC17.52■□□□□ 0.39
Xrn1P97789 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC17.52■□□□□ 0.39
Xrn1P97789 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Xrn1P97789 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.52■□□□□ 0.39
Xrn1P97789 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Xrn1P97789 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Xrn1P97789 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Xrn1P97789 AC129931.1-201ENSMUST00000228865 1861 ntBASIC17.52■□□□□ 0.39
Xrn1P97789 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Xrn1P97789 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
Xrn1P97789 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Xrn1P97789 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC17.51■□□□□ 0.39
Xrn1P97789 Gm5380-201ENSMUST00000119296 2136 ntBASIC17.51■□□□□ 0.39
Xrn1P97789 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Xrn1P97789 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC17.51■□□□□ 0.39
Xrn1P97789 Gm11354-201ENSMUST00000121974 422 ntBASIC17.51■□□□□ 0.39
Xrn1P97789 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Gm8531-201ENSMUST00000188319 893 ntBASIC17.51■□□□□ 0.39
Xrn1P97789 Gm29410-201ENSMUST00000188383 694 ntBASIC17.51■□□□□ 0.39
Xrn1P97789 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC17.51■□□□□ 0.39
Xrn1P97789 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC17.51■□□□□ 0.39
Xrn1P97789 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC17.51■□□□□ 0.39
Xrn1P97789 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Xrn1P97789 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrn1P97789 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC17.5■□□□□ 0.39
Xrn1P97789 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Gm6189-201ENSMUST00000164487 2082 ntBASIC17.5■□□□□ 0.39
Xrn1P97789 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC17.5■□□□□ 0.39
Xrn1P97789 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
Xrn1P97789 Gm11801-201ENSMUST00000117807 746 ntBASIC17.5■□□□□ 0.39
Xrn1P97789 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC17.5■□□□□ 0.39
Xrn1P97789 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Gm9192-201ENSMUST00000183221 985 ntBASIC17.5■□□□□ 0.39
Xrn1P97789 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 AC115122.1-201ENSMUST00000224850 1040 ntBASIC17.5■□□□□ 0.39
Xrn1P97789 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrn1P97789 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Xrn1P97789 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms