Protein–RNA interactions for Protein: P97452

Bop1, Ribosome biogenesis protein BOP1, mousemouse

Known RBP Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bop1P97452 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Bop1P97452 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.42□□□□□ -0.42
Bop1P97452 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Bop1P97452 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Bop1P97452 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.42□□□□□ -0.42
Bop1P97452 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Bop1P97452 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Bop1P97452 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Bop1P97452 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.42□□□□□ -0.42
Bop1P97452 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.42□□□□□ -0.42
Bop1P97452 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Gm6091-201ENSMUST00000098307 165 ntBASIC12.42□□□□□ -0.42
Bop1P97452 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Bop1P97452 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.42□□□□□ -0.42
Bop1P97452 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Bop1P97452 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bop1P97452 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.41□□□□□ -0.42
Bop1P97452 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Bop1P97452 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Bop1P97452 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Bop1P97452 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.41□□□□□ -0.42
Bop1P97452 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.41□□□□□ -0.42
Bop1P97452 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.41□□□□□ -0.42
Bop1P97452 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.41□□□□□ -0.42
Bop1P97452 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.41□□□□□ -0.42
Bop1P97452 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.41□□□□□ -0.42
Bop1P97452 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Bop1P97452 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Gm10012-201ENSMUST00000078252 192 ntBASIC12.41□□□□□ -0.42
Bop1P97452 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Bop1P97452 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.41□□□□□ -0.42
Bop1P97452 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Bop1P97452 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.41□□□□□ -0.42
Bop1P97452 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Bop1P97452 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bop1P97452 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Bop1P97452 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Bop1P97452 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.4□□□□□ -0.42
Bop1P97452 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Bop1P97452 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Bop1P97452 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Bop1P97452 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Bop1P97452 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Bop1P97452 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Bop1P97452 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.4□□□□□ -0.42
Bop1P97452 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Bop1P97452 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Bop1P97452 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Bop1P97452 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Bop1P97452 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.4□□□□□ -0.42
Bop1P97452 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.4□□□□□ -0.42
Bop1P97452 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.4□□□□□ -0.42
Bop1P97452 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.4□□□□□ -0.42
Bop1P97452 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.4□□□□□ -0.42
Bop1P97452 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.4□□□□□ -0.42
Bop1P97452 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Bop1P97452 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms