Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.41□□□□□ -0.42
Lhx1P63006 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.41□□□□□ -0.42
Lhx1P63006 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lhx1P63006 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Lhx1P63006 Gm25214-201ENSMUST00000104573 129 ntBASIC12.41□□□□□ -0.42
Lhx1P63006 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lhx1P63006 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.41□□□□□ -0.42
Lhx1P63006 Gm14999-201ENSMUST00000121039 624 ntBASIC12.41□□□□□ -0.42
Lhx1P63006 Gm15547-201ENSMUST00000122152 333 ntBASIC12.41□□□□□ -0.42
Lhx1P63006 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lhx1P63006 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.41□□□□□ -0.42
Lhx1P63006 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.41□□□□□ -0.42
Lhx1P63006 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.41□□□□□ -0.42
Lhx1P63006 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lhx1P63006 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lhx1P63006 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Lhx1P63006 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lhx1P63006 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lhx1P63006 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lhx1P63006 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.4□□□□□ -0.42
Lhx1P63006 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lhx1P63006 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.4□□□□□ -0.42
Lhx1P63006 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lhx1P63006 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Gm11930-201ENSMUST00000117788 190 ntBASIC12.4□□□□□ -0.42
Lhx1P63006 Gm11597-201ENSMUST00000121423 964 ntBASIC12.4□□□□□ -0.42
Lhx1P63006 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lhx1P63006 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.4□□□□□ -0.42
Lhx1P63006 Gm13570-201ENSMUST00000140763 309 ntBASIC12.4□□□□□ -0.42
Lhx1P63006 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.4□□□□□ -0.42
Lhx1P63006 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.4□□□□□ -0.42
Lhx1P63006 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.4□□□□□ -0.42
Lhx1P63006 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.4□□□□□ -0.42
Lhx1P63006 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Lhx1P63006 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Lhx1P63006 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lhx1P63006 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lhx1P63006 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.39□□□□□ -0.43
Lhx1P63006 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.39□□□□□ -0.43
Lhx1P63006 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lhx1P63006 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lhx1P63006 Gm23270-201ENSMUST00000104055 131 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms