Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.16□□□□□ -0.62
Sec61a1P61620 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a1P61620 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sec61a1P61620 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.16□□□□□ -0.62
Sec61a1P61620 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.15□□□□□ -0.62
Sec61a1P61620 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sec61a1P61620 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Sec61a1P61620 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sec61a1P61620 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sec61a1P61620 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Gm15824-201ENSMUST00000119516 955 ntBASIC11.15□□□□□ -0.62
Sec61a1P61620 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.15□□□□□ -0.62
Sec61a1P61620 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.15□□□□□ -0.62
Sec61a1P61620 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.15□□□□□ -0.62
Sec61a1P61620 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.15□□□□□ -0.62
Sec61a1P61620 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.15□□□□□ -0.62
Sec61a1P61620 Gm44397-201ENSMUST00000195950 113 ntBASIC11.15□□□□□ -0.62
Sec61a1P61620 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.15□□□□□ -0.62
Sec61a1P61620 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sec61a1P61620 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.15□□□□□ -0.62
Sec61a1P61620 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.15□□□□□ -0.62
Sec61a1P61620 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.15□□□□□ -0.62
Sec61a1P61620 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sec61a1P61620 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sec61a1P61620 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sec61a1P61620 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Sec61a1P61620 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.63
Sec61a1P61620 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.15□□□□□ -0.63
Sec61a1P61620 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
Sec61a1P61620 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.15□□□□□ -0.63
Sec61a1P61620 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sec61a1P61620 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sec61a1P61620 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Sec61a1P61620 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sec61a1P61620 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.15□□□□□ -0.63
Sec61a1P61620 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.15□□□□□ -0.63
Sec61a1P61620 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sec61a1P61620 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Sec61a1P61620 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.14□□□□□ -0.63
Sec61a1P61620 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sec61a1P61620 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sec61a1P61620 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.14□□□□□ -0.63
Sec61a1P61620 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.14□□□□□ -0.63
Sec61a1P61620 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Sec61a1P61620 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Gm8652-201ENSMUST00000181363 964 ntBASIC11.14□□□□□ -0.63
Sec61a1P61620 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.14□□□□□ -0.63
Sec61a1P61620 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.14□□□□□ -0.63
Sec61a1P61620 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Gm17794-201ENSMUST00000220252 955 ntBASIC11.14□□□□□ -0.63
Sec61a1P61620 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sec61a1P61620 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms