Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Gm5187-201ENSMUST00000117317 991 ntBASIC13.64□□□□□ -0.23
Nub1P54729 Gm12957-201ENSMUST00000117835 377 ntBASIC13.64□□□□□ -0.23
Nub1P54729 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Nub1P54729 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Gm5370-201ENSMUST00000187187 574 ntBASIC13.64□□□□□ -0.23
Nub1P54729 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.64□□□□□ -0.23
Nub1P54729 Gm38092-201ENSMUST00000195600 653 ntBASIC13.64□□□□□ -0.23
Nub1P54729 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.64□□□□□ -0.23
Nub1P54729 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.64□□□□□ -0.23
Nub1P54729 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nub1P54729 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nub1P54729 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.64□□□□□ -0.23
Nub1P54729 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.64□□□□□ -0.23
Nub1P54729 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nub1P54729 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nub1P54729 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nub1P54729 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nub1P54729 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.63□□□□□ -0.23
Nub1P54729 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.63□□□□□ -0.23
Nub1P54729 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.63□□□□□ -0.23
Nub1P54729 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.63□□□□□ -0.23
Nub1P54729 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.63□□□□□ -0.23
Nub1P54729 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Gm3890-201ENSMUST00000182416 207 ntBASIC13.63□□□□□ -0.23
Nub1P54729 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nub1P54729 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.63□□□□□ -0.23
Nub1P54729 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.63□□□□□ -0.23
Nub1P54729 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.63□□□□□ -0.23
Nub1P54729 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.63□□□□□ -0.23
Nub1P54729 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.63□□□□□ -0.23
Nub1P54729 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nub1P54729 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.63□□□□□ -0.23
Nub1P54729 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.63□□□□□ -0.23
Nub1P54729 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nub1P54729 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nub1P54729 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Nub1P54729 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nub1P54729 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.62□□□□□ -0.23
Nub1P54729 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Nub1P54729 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.62□□□□□ -0.23
Nub1P54729 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.62□□□□□ -0.23
Nub1P54729 Gm16296-201ENSMUST00000159905 325 ntBASIC13.62□□□□□ -0.23
Nub1P54729 Gm37008-201ENSMUST00000195712 319 ntBASIC13.62□□□□□ -0.23
Nub1P54729 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.62□□□□□ -0.23
Nub1P54729 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.62□□□□□ -0.23
Nub1P54729 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nub1P54729 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Nub1P54729 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nub1P54729 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms