Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox3P53784 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox3P53784 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox3P53784 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox3P53784 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.13□□□□□ -0.47
Sox3P53784 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Sox3P53784 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.13□□□□□ -0.47
Sox3P53784 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.13□□□□□ -0.47
Sox3P53784 Mir6927-201ENSMUST00000184494 71 ntBASIC12.13□□□□□ -0.47
Sox3P53784 Gm38144-201ENSMUST00000192790 465 ntBASIC12.13□□□□□ -0.47
Sox3P53784 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sox3P53784 Gm43378-201ENSMUST00000199336 582 ntBASIC12.13□□□□□ -0.47
Sox3P53784 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.13□□□□□ -0.47
Sox3P53784 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox3P53784 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.13□□□□□ -0.47
Sox3P53784 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sox3P53784 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.13□□□□□ -0.47
Sox3P53784 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox3P53784 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox3P53784 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox3P53784 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.12□□□□□ -0.47
Sox3P53784 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.12□□□□□ -0.47
Sox3P53784 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.12□□□□□ -0.47
Sox3P53784 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox3P53784 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Gm11331-201ENSMUST00000119764 288 ntBASIC12.12□□□□□ -0.47
Sox3P53784 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Gm24548-201ENSMUST00000158650 108 ntBASIC12.12□□□□□ -0.47
Sox3P53784 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.12□□□□□ -0.47
Sox3P53784 Gm25732-201ENSMUST00000175168 60 ntBASIC12.12□□□□□ -0.47
Sox3P53784 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Sox3P53784 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.12□□□□□ -0.47
Sox3P53784 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sox3P53784 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.12□□□□□ -0.47
Sox3P53784 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.12□□□□□ -0.47
Sox3P53784 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Sox3P53784 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sox3P53784 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.12□□□□□ -0.47
Sox3P53784 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox3P53784 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.11□□□□□ -0.47
Sox3P53784 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sox3P53784 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms