Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pdx1P52946 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.49□□□□□ -0.41
Pdx1P52946 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pdx1P52946 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pdx1P52946 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.49□□□□□ -0.41
Pdx1P52946 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pdx1P52946 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pdx1P52946 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.48□□□□□ -0.41
Pdx1P52946 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pdx1P52946 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.48□□□□□ -0.41
Pdx1P52946 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Gm6023-201ENSMUST00000118217 606 ntBASIC12.48□□□□□ -0.41
Pdx1P52946 Gm13316-201ENSMUST00000140537 691 ntBASIC12.48□□□□□ -0.41
Pdx1P52946 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.48□□□□□ -0.41
Pdx1P52946 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.48□□□□□ -0.41
Pdx1P52946 Gm17420-201ENSMUST00000164753 153 ntBASIC12.48□□□□□ -0.41
Pdx1P52946 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Pdx1P52946 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.48□□□□□ -0.41
Pdx1P52946 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.48□□□□□ -0.41
Pdx1P52946 Gm5904-201ENSMUST00000210286 865 ntBASIC12.48□□□□□ -0.41
Pdx1P52946 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.48□□□□□ -0.41
Pdx1P52946 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pdx1P52946 Gm26035-201ENSMUST00000083065 308 ntBASIC12.48□□□□□ -0.41
Pdx1P52946 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdx1P52946 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pdx1P52946 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Pdx1P52946 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Gm43118-201ENSMUST00000199149 775 ntBASIC12.47□□□□□ -0.41
Pdx1P52946 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.47□□□□□ -0.41
Pdx1P52946 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.47□□□□□ -0.41
Pdx1P52946 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Gm10478-201ENSMUST00000084451 396 ntBASIC12.47□□□□□ -0.41
Pdx1P52946 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Pdx1P52946 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdx1P52946 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Pdx1P52946 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pdx1P52946 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.46□□□□□ -0.41
Pdx1P52946 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms