Protein–RNA interactions for Protein: P30882

Ccl5, C-C motif chemokine 5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl5P30882 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl5P30882 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.92□□□□□ -0.34
Ccl5P30882 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl5P30882 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl5P30882 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl5P30882 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl5P30882 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl5P30882 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl5P30882 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl5P30882 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Ccl5P30882 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl5P30882 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccl5P30882 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccl5P30882 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ccl5P30882 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl5P30882 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Ccl5P30882 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl5P30882 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.92□□□□□ -0.34
Ccl5P30882 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccl5P30882 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccl5P30882 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.91□□□□□ -0.34
Ccl5P30882 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Gm11354-201ENSMUST00000121974 422 ntBASIC12.91□□□□□ -0.34
Ccl5P30882 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.91□□□□□ -0.34
Ccl5P30882 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Gm29410-201ENSMUST00000188383 694 ntBASIC12.91□□□□□ -0.34
Ccl5P30882 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.91□□□□□ -0.34
Ccl5P30882 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.91□□□□□ -0.34
Ccl5P30882 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Gm4604-201ENSMUST00000025040 390 ntBASIC12.91□□□□□ -0.34
Ccl5P30882 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.91□□□□□ -0.34
Ccl5P30882 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.91□□□□□ -0.34
Ccl5P30882 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccl5P30882 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Ccl5P30882 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.91□□□□□ -0.34
Ccl5P30882 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl5P30882 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl5P30882 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ccl5P30882 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccl5P30882 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl5P30882 Gm12943-201ENSMUST00000119616 210 ntBASIC12.9□□□□□ -0.34
Ccl5P30882 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccl5P30882 Rprl1-201ENSMUST00000158050 327 ntBASIC12.9□□□□□ -0.34
Ccl5P30882 Gm9022-201ENSMUST00000182482 992 ntBASIC12.9□□□□□ -0.34
Ccl5P30882 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl5P30882 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl5P30882 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl5P30882 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Gm9797-202ENSMUST00000218003 294 ntBASIC12.9□□□□□ -0.34
Ccl5P30882 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl5P30882 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl5P30882 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccl5P30882 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms