Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.5□□□□□ -0.25
Mmp3P28862 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Mmp3P28862 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Mmp3P28862 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Mmp3P28862 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Mmp3P28862 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.5□□□□□ -0.25
Mmp3P28862 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp3P28862 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.49□□□□□ -0.25
Mmp3P28862 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp3P28862 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Mmp3P28862 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp3P28862 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.49□□□□□ -0.25
Mmp3P28862 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp3P28862 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.49□□□□□ -0.25
Mmp3P28862 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp3P28862 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.49□□□□□ -0.25
Mmp3P28862 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.49□□□□□ -0.25
Mmp3P28862 Mir6927-201ENSMUST00000184494 71 ntBASIC13.49□□□□□ -0.25
Mmp3P28862 Gm19187-201ENSMUST00000206781 892 ntBASIC13.49□□□□□ -0.25
Mmp3P28862 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.49□□□□□ -0.25
Mmp3P28862 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.49□□□□□ -0.25
Mmp3P28862 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.49□□□□□ -0.25
Mmp3P28862 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp3P28862 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Mmp3P28862 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.49□□□□□ -0.25
Mmp3P28862 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp3P28862 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp3P28862 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Mmp3P28862 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp3P28862 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp3P28862 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp3P28862 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp3P28862 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp3P28862 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Mmp3P28862 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Mmp3P28862 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.48□□□□□ -0.25
Mmp3P28862 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.48□□□□□ -0.25
Mmp3P28862 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.48□□□□□ -0.25
Mmp3P28862 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Mmp3P28862 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Mmp3P28862 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Mmp3P28862 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Mmp3P28862 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Gm28450-201ENSMUST00000187349 638 ntBASIC13.48□□□□□ -0.25
Mmp3P28862 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Mmp3P28862 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Mmp3P28862 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.48□□□□□ -0.25
Mmp3P28862 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.48□□□□□ -0.25
Mmp3P28862 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Mmp3P28862 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp3P28862 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.47□□□□□ -0.25
Mmp3P28862 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp3P28862 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp3P28862 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp3P28862 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp3P28862 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp3P28862 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp3P28862 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp3P28862 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp3P28862 Gm14644-201ENSMUST00000116671 647 ntBASIC13.47□□□□□ -0.25
Mmp3P28862 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.47□□□□□ -0.25
Mmp3P28862 Gm24749-201ENSMUST00000157838 343 ntBASIC13.47□□□□□ -0.25
Mmp3P28862 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp3P28862 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Mmp3P28862 Gm45433-201ENSMUST00000209386 247 ntBASIC13.47□□□□□ -0.25
Mmp3P28862 Gm19208-201ENSMUST00000213861 912 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms