Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.53□□□□□ -0.72
Col8a2P25318 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.53□□□□□ -0.72
Col8a2P25318 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.53□□□□□ -0.72
Col8a2P25318 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.53□□□□□ -0.72
Col8a2P25318 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Col8a2P25318 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.53□□□□□ -0.72
Col8a2P25318 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Col8a2P25318 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Col8a2P25318 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Col8a2P25318 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Col8a2P25318 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Col8a2P25318 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Col8a2P25318 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Col8a2P25318 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.52□□□□□ -0.72
Col8a2P25318 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.52□□□□□ -0.73
Col8a2P25318 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Gm10434-201ENSMUST00000101158 471 ntBASIC10.52□□□□□ -0.73
Col8a2P25318 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Col8a2P25318 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.52□□□□□ -0.73
Col8a2P25318 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Gm26083-201ENSMUST00000157904 193 ntBASIC10.52□□□□□ -0.73
Col8a2P25318 Gm24845-201ENSMUST00000158034 109 ntBASIC10.52□□□□□ -0.73
Col8a2P25318 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.52□□□□□ -0.73
Col8a2P25318 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.52□□□□□ -0.73
Col8a2P25318 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.52□□□□□ -0.73
Col8a2P25318 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.52□□□□□ -0.73
Col8a2P25318 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.52□□□□□ -0.73
Col8a2P25318 Gm8712-201ENSMUST00000221090 701 ntBASIC10.52□□□□□ -0.73
Col8a2P25318 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.52□□□□□ -0.73
Col8a2P25318 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.52□□□□□ -0.73
Col8a2P25318 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Col8a2P25318 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.52□□□□□ -0.73
Col8a2P25318 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.52□□□□□ -0.73
Col8a2P25318 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Col8a2P25318 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Col8a2P25318 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Col8a2P25318 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Col8a2P25318 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.51□□□□□ -0.73
Col8a2P25318 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.51□□□□□ -0.73
Col8a2P25318 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
Col8a2P25318 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Col8a2P25318 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Col8a2P25318 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms