Protein–RNA interactions for Protein: P07350

Ifna6, Interferon alpha-6, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna6P07350 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Ifna6P07350 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.36□□□□□ -0.75
Ifna6P07350 Gm5687-201ENSMUST00000118252 640 ntBASIC10.36□□□□□ -0.75
Ifna6P07350 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.36□□□□□ -0.75
Ifna6P07350 Gm44397-201ENSMUST00000195950 113 ntBASIC10.36□□□□□ -0.75
Ifna6P07350 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.36□□□□□ -0.75
Ifna6P07350 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Mir339-201ENSMUST00000083659 96 ntBASIC10.36□□□□□ -0.75
Ifna6P07350 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.36□□□□□ -0.75
Ifna6P07350 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.36□□□□□ -0.75
Ifna6P07350 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.36□□□□□ -0.75
Ifna6P07350 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ifna6P07350 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ifna6P07350 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.36□□□□□ -0.75
Ifna6P07350 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ifna6P07350 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ifna6P07350 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ifna6P07350 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ifna6P07350 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.35□□□□□ -0.75
Ifna6P07350 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Ifna6P07350 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.35□□□□□ -0.75
Ifna6P07350 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ifna6P07350 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Gm14350-201ENSMUST00000116642 640 ntBASIC10.35□□□□□ -0.75
Ifna6P07350 Gm13223-201ENSMUST00000118609 747 ntBASIC10.35□□□□□ -0.75
Ifna6P07350 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ifna6P07350 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.35□□□□□ -0.75
Ifna6P07350 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.35□□□□□ -0.75
Ifna6P07350 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.35□□□□□ -0.75
Ifna6P07350 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.35□□□□□ -0.75
Ifna6P07350 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.35□□□□□ -0.75
Ifna6P07350 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.35□□□□□ -0.75
Ifna6P07350 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.35□□□□□ -0.75
Ifna6P07350 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ifna6P07350 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ifna6P07350 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Ifna6P07350 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.34□□□□□ -0.75
Ifna6P07350 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ifna6P07350 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms