Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Syn1O88935 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.02□□□□□ -0.33
Syn1O88935 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Syn1O88935 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.01□□□□□ -0.33
Syn1O88935 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Gm12501-201ENSMUST00000119163 529 ntBASIC13.01□□□□□ -0.33
Syn1O88935 Gm11941-201ENSMUST00000119904 610 ntBASIC13.01□□□□□ -0.33
Syn1O88935 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Gm3793-201ENSMUST00000204973 672 ntBASIC13.01□□□□□ -0.33
Syn1O88935 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Syn1O88935 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.01□□□□□ -0.33
Syn1O88935 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Gm21811-201ENSMUST00000096485 930 ntBASIC13.01□□□□□ -0.33
Syn1O88935 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.01□□□□□ -0.33
Syn1O88935 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.01□□□□□ -0.33
Syn1O88935 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.01□□□□□ -0.33
Syn1O88935 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Syn1O88935 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Syn1O88935 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Syn1O88935 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13□□□□□ -0.33
Syn1O88935 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Syn1O88935 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13□□□□□ -0.33
Syn1O88935 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13□□□□□ -0.33
Syn1O88935 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13□□□□□ -0.33
Syn1O88935 Gm43061-201ENSMUST00000198850 2241 ntBASIC13□□□□□ -0.33
Syn1O88935 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Syn1O88935 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Syn1O88935 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Syn1O88935 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Syn1O88935 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Syn1O88935 Gm28882-201ENSMUST00000185504 314 ntBASIC13□□□□□ -0.33
Syn1O88935 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13□□□□□ -0.33
Syn1O88935 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13□□□□□ -0.33
Syn1O88935 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Syn1O88935 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Syn1O88935 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Syn1O88935 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Syn1O88935 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Syn1O88935 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Syn1O88935 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Syn1O88935 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Syn1O88935 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Syn1O88935 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13□□□□□ -0.33
Syn1O88935 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Syn1O88935 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Syn1O88935 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.99□□□□□ -0.33
Syn1O88935 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Syn1O88935 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Syn1O88935 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Syn1O88935 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Syn1O88935 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.99□□□□□ -0.33
Syn1O88935 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.99□□□□□ -0.33
Syn1O88935 Gm15573-201ENSMUST00000119487 540 ntBASIC12.99□□□□□ -0.33
Syn1O88935 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.99□□□□□ -0.33
Syn1O88935 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Syn1O88935 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.99□□□□□ -0.33
Syn1O88935 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.99□□□□□ -0.33
Syn1O88935 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.99□□□□□ -0.33
Syn1O88935 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms