Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.52□□□□□ -0.41
Pdlim1O70400 Gm13786-201ENSMUST00000122371 333 ntBASIC12.52□□□□□ -0.41
Pdlim1O70400 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Pdlim1O70400 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.52□□□□□ -0.41
Pdlim1O70400 Gm38158-201ENSMUST00000194617 339 ntBASIC12.52□□□□□ -0.41
Pdlim1O70400 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.52□□□□□ -0.41
Pdlim1O70400 Gm43630-201ENSMUST00000201550 776 ntBASIC12.52□□□□□ -0.41
Pdlim1O70400 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Pdlim1O70400 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.52□□□□□ -0.41
Pdlim1O70400 Gm9899-201ENSMUST00000065519 555 ntBASIC12.52□□□□□ -0.41
Pdlim1O70400 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pdlim1O70400 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.52□□□□□ -0.41
Pdlim1O70400 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pdlim1O70400 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pdlim1O70400 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Pdlim1O70400 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.51□□□□□ -0.41
Pdlim1O70400 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.51□□□□□ -0.41
Pdlim1O70400 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.51□□□□□ -0.41
Pdlim1O70400 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.51□□□□□ -0.41
Pdlim1O70400 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Pdlim1O70400 Rmrp-201ENSMUST00000157463 271 ntBASIC12.51□□□□□ -0.41
Pdlim1O70400 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.51□□□□□ -0.41
Pdlim1O70400 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.51□□□□□ -0.41
Pdlim1O70400 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.51□□□□□ -0.41
Pdlim1O70400 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.51□□□□□ -0.41
Pdlim1O70400 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.51□□□□□ -0.41
Pdlim1O70400 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pdlim1O70400 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.51□□□□□ -0.41
Pdlim1O70400 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pdlim1O70400 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Pdlim1O70400 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pdlim1O70400 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.51□□□□□ -0.41
Pdlim1O70400 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.5□□□□□ -0.41
Pdlim1O70400 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.5□□□□□ -0.41
Pdlim1O70400 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Gm12058-201ENSMUST00000118614 437 ntBASIC12.5□□□□□ -0.41
Pdlim1O70400 Gm13736-201ENSMUST00000119272 253 ntBASIC12.5□□□□□ -0.41
Pdlim1O70400 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Gm13316-201ENSMUST00000140537 691 ntBASIC12.5□□□□□ -0.41
Pdlim1O70400 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Gm7046-201ENSMUST00000221351 977 ntBASIC12.5□□□□□ -0.41
Pdlim1O70400 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms