Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Srp54bE9PXC0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gm13665-201ENSMUST00000120830 528 ntBASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Mir5132-201ENSMUST00000175166 71 ntBASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gm8712-201ENSMUST00000221090 701 ntBASIC12.48□□□□□ -0.41
Srp54bE9PXC0 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.48□□□□□ -0.41
Srp54bE9PXC0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Gm24990-201ENSMUST00000157406 323 ntBASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Gm16505-201ENSMUST00000179981 232 ntBASIC12.47□□□□□ -0.41
Srp54bE9PXC0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Mir7070-201ENSMUST00000183657 86 ntBASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Gm2260-201ENSMUST00000184965 657 ntBASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Gm8885-201ENSMUST00000189382 598 ntBASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.47□□□□□ -0.41
Srp54bE9PXC0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Srp54bE9PXC0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms