Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Shank1D3YZU1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.32□□□□□ -0.6
Shank1D3YZU1 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Shank1D3YZU1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Gm5616-201ENSMUST00000165252 384 ntBASIC11.32□□□□□ -0.6
Shank1D3YZU1 Gm8741-201ENSMUST00000174736 384 ntBASIC11.32□□□□□ -0.6
Shank1D3YZU1 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Cog3-203ENSMUST00000227473 4197 ntBASIC11.32□□□□□ -0.6
Shank1D3YZU1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.32□□□□□ -0.6
Shank1D3YZU1 Grk6-205ENSMUST00000224653 2976 ntBASIC11.32□□□□□ -0.6
Shank1D3YZU1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Shank1D3YZU1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm12165-201ENSMUST00000117047 342 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm15515-201ENSMUST00000117827 822 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm29615-201ENSMUST00000185371 697 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm28224-201ENSMUST00000186078 697 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm29001-201ENSMUST00000186177 697 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm28292-201ENSMUST00000186593 697 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm28101-201ENSMUST00000187608 697 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm29076-201ENSMUST00000187689 697 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm28302-201ENSMUST00000187931 697 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm28646-201ENSMUST00000188220 697 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm28205-201ENSMUST00000189177 697 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm29032-201ENSMUST00000189797 697 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm28695-201ENSMUST00000190300 697 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm37448-201ENSMUST00000192795 697 ntBASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.31□□□□□ -0.6
Shank1D3YZU1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms