Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.66□□□□□ -0.7
Col6a4A2AX52 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Gm5616-201ENSMUST00000165252 384 ntBASIC10.66□□□□□ -0.7
Col6a4A2AX52 Gm8741-201ENSMUST00000174736 384 ntBASIC10.66□□□□□ -0.7
Col6a4A2AX52 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.66□□□□□ -0.7
Col6a4A2AX52 Gm1821-202ENSMUST00000227415 750 ntBASIC10.66□□□□□ -0.7
Col6a4A2AX52 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col6a4A2AX52 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Col6a4A2AX52 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.65□□□□□ -0.7
Col6a4A2AX52 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.65□□□□□ -0.7
Col6a4A2AX52 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Col6a4A2AX52 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Col6a4A2AX52 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Col6a4A2AX52 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Col6a4A2AX52 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Col6a4A2AX52 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Col6a4A2AX52 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Col6a4A2AX52 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Col6a4A2AX52 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Col6a4A2AX52 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Gm14704-201ENSMUST00000120300 874 ntBASIC10.64□□□□□ -0.71
Col6a4A2AX52 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Gm23218-201ENSMUST00000158124 276 ntBASIC10.64□□□□□ -0.71
Col6a4A2AX52 Gm29155-201ENSMUST00000185910 269 ntBASIC10.64□□□□□ -0.71
Col6a4A2AX52 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Gm13492-201ENSMUST00000119772 665 ntBASIC10.64□□□□□ -0.71
Col6a4A2AX52 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.64□□□□□ -0.71
Col6a4A2AX52 Gm7666-201ENSMUST00000146631 819 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms