Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Gm44651-201ENSMUST00000207343 372 ntBASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smarcb1Q9Z0H3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Gm24845-201ENSMUST00000158034 109 ntBASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Gm5363-201ENSMUST00000211927 938 ntBASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smarcb1Q9Z0H3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Gm24231-201ENSMUST00000104315 133 ntBASIC13.11□□□□□ -0.31
Smarcb1Q9Z0H3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms