Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Mir874-201ENSMUST00000104769 76 ntBASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Gm2517-201ENSMUST00000215651 348 ntBASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Gm807-202ENSMUST00000224929 408 ntBASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx2-4Q9EQM3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Gm17889-201ENSMUST00000198410 598 ntBASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Snora73b-201ENSMUST00000083419 205 ntBASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx2-4Q9EQM3 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Gm11246-201ENSMUST00000120880 345 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms