Protein–RNA interactions for Protein: Q9DA73

Ccdc89, Coiled-coil domain-containing protein 89, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc89Q9DA73 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Gm12363-201ENSMUST00000122250 668 ntBASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Gm7561-201ENSMUST00000211203 886 ntBASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc89Q9DA73 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Gm29649-201ENSMUST00000185649 419 ntBASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.85□□□□□ -0.19
Ccdc89Q9DA73 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.84□□□□□ -0.19
Ccdc89Q9DA73 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms