Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snf8Q9CZ28 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snf8Q9CZ28 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Snf8Q9CZ28 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Snf8Q9CZ28 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Snf8Q9CZ28 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Snf8Q9CZ28 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Snf8Q9CZ28 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Snf8Q9CZ28 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Snf8Q9CZ28 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Snf8Q9CZ28 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Snf8Q9CZ28 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Snf8Q9CZ28 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Snf8Q9CZ28 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.02□□□□□ -0.32
Snf8Q9CZ28 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Snf8Q9CZ28 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Gm12859-201ENSMUST00000117834 427 ntBASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Gm14704-201ENSMUST00000120300 874 ntBASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Gm7063-201ENSMUST00000186840 981 ntBASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.01□□□□□ -0.33
Snf8Q9CZ28 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Snf8Q9CZ28 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13□□□□□ -0.33
Snf8Q9CZ28 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Snf8Q9CZ28 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Snf8Q9CZ28 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Snf8Q9CZ28 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13□□□□□ -0.33
Snf8Q9CZ28 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Gm11618-201ENSMUST00000117946 267 ntBASIC13□□□□□ -0.33
Snf8Q9CZ28 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13□□□□□ -0.33
Snf8Q9CZ28 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13□□□□□ -0.33
Snf8Q9CZ28 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Snf8Q9CZ28 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Snf8Q9CZ28 Gm7446-201ENSMUST00000221035 1240 ntBASIC13□□□□□ -0.33
Snf8Q9CZ28 AC238811.3-201ENSMUST00000225422 709 ntBASIC13□□□□□ -0.33
Snf8Q9CZ28 CT025535.1-201ENSMUST00000227172 491 ntBASIC13□□□□□ -0.33
Snf8Q9CZ28 AC132317.1-201ENSMUST00000227227 962 ntBASIC13□□□□□ -0.33
Snf8Q9CZ28 Gm10371-202ENSMUST00000228010 1081 ntBASIC13□□□□□ -0.33
Snf8Q9CZ28 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Snf8Q9CZ28 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms