Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim8Q99PJ2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Gm44069-201ENSMUST00000204898 506 ntBASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Gm6983-201ENSMUST00000214912 628 ntBASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim8Q99PJ2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.4□□□□□ -0.42
Trim8Q99PJ2 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim8Q99PJ2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim8Q99PJ2 Gm18307-201ENSMUST00000206864 949 ntBASIC12.39□□□□□ -0.43
Trim8Q99PJ2 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.39□□□□□ -0.43
Trim8Q99PJ2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms