Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx6-1Q99MA9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx6-1Q99MA9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Nkx6-1Q99MA9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx6-1Q99MA9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Gm12380-201ENSMUST00000119012 544 ntBASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Gm11450-201ENSMUST00000121144 333 ntBASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Gm8194-201ENSMUST00000159783 859 ntBASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Gm19353-201ENSMUST00000184561 445 ntBASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Gm28882-201ENSMUST00000185504 314 ntBASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx6-1Q99MA9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm23949-201ENSMUST00000104027 127 ntBASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm16397-201ENSMUST00000122201 494 ntBASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm10051-201ENSMUST00000145209 414 ntBASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Gm28071-201ENSMUST00000190355 478 ntBASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nkx6-1Q99MA9 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms