Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vmp1Q99KU0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Gm14350-201ENSMUST00000116642 640 ntBASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Gm16202-201ENSMUST00000117532 544 ntBASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Mir7221-201ENSMUST00000184009 72 ntBASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Vmp1Q99KU0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Gm11618-201ENSMUST00000117946 267 ntBASIC12.24□□□□□ -0.45
Vmp1Q99KU0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.24□□□□□ -0.45
Vmp1Q99KU0 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.24□□□□□ -0.45
Vmp1Q99KU0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms