Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Gm13045-201ENSMUST00000119019 712 ntBASIC19.7■□□□□ 0.74
Clip1Q922J3 Gm11450-201ENSMUST00000121144 333 ntBASIC19.7■□□□□ 0.74
Clip1Q922J3 Gm14760-201ENSMUST00000121831 999 ntBASIC19.7■□□□□ 0.74
Clip1Q922J3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clip1Q922J3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip1Q922J3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip1Q922J3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC19.7■□□□□ 0.74
Clip1Q922J3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC19.7■□□□□ 0.74
Clip1Q922J3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clip1Q922J3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Clip1Q922J3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC19.69■□□□□ 0.74
Clip1Q922J3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Clip1Q922J3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC19.69■□□□□ 0.74
Clip1Q922J3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Clip1Q922J3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC19.69■□□□□ 0.74
Clip1Q922J3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip1Q922J3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Clip1Q922J3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip1Q922J3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clip1Q922J3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clip1Q922J3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip1Q922J3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Clip1Q922J3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clip1Q922J3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC19.68■□□□□ 0.74
Clip1Q922J3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clip1Q922J3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip1Q922J3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip1Q922J3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Clip1Q922J3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip1Q922J3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip1Q922J3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip1Q922J3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC19.68■□□□□ 0.74
Clip1Q922J3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clip1Q922J3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Clip1Q922J3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC19.68■□□□□ 0.74
Clip1Q922J3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC19.68■□□□□ 0.74
Clip1Q922J3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clip1Q922J3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 Gm3052-202ENSMUST00000188254 2224 ntBASIC19.67■□□□□ 0.74
Clip1Q922J3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 Gm37691-201ENSMUST00000192147 2573 ntBASIC19.67■□□□□ 0.74
Clip1Q922J3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Clip1Q922J3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC19.67■□□□□ 0.74
Clip1Q922J3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC19.67■□□□□ 0.74
Clip1Q922J3 Gm9211-201ENSMUST00000182882 975 ntBASIC19.67■□□□□ 0.74
Clip1Q922J3 Gm18556-201ENSMUST00000219748 1031 ntBASIC19.67■□□□□ 0.74
Clip1Q922J3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Clip1Q922J3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Clip1Q922J3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip1Q922J3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Gm45643-201ENSMUST00000211364 1484 ntBASIC19.66■□□□□ 0.74
Clip1Q922J3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Clip1Q922J3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC19.66■□□□□ 0.74
Clip1Q922J3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC19.66■□□□□ 0.74
Clip1Q922J3 Gm28071-201ENSMUST00000190355 478 ntBASIC19.66■□□□□ 0.74
Clip1Q922J3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC19.66■□□□□ 0.74
Clip1Q922J3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC19.66■□□□□ 0.74
Clip1Q922J3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC19.66■□□□□ 0.74
Clip1Q922J3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip1Q922J3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms