Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Gm13369-201ENSMUST00000119442 987 ntBASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Gm11918-201ENSMUST00000121660 179 ntBASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Gm26185-201ENSMUST00000157692 266 ntBASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lsm1Q8VC85 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Lsm1Q8VC85 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Lsm1Q8VC85 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Lsm1Q8VC85 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm1Q8VC85 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Lsm1Q8VC85 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm1Q8VC85 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm1Q8VC85 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Lsm1Q8VC85 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Gm16296-201ENSMUST00000159905 325 ntBASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Gm6244-201ENSMUST00000178732 841 ntBASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Gm24196-201ENSMUST00000179161 110 ntBASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Gm19184-201ENSMUST00000196798 928 ntBASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.14□□□□□ -0.47
Lsm1Q8VC85 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.14□□□□□ -0.47
Lsm1Q8VC85 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms