Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp2a1Q8R429 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Atp2a1Q8R429 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atp2a1Q8R429 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.16□□□□□ -0.14
Atp2a1Q8R429 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atp2a1Q8R429 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atp2a1Q8R429 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Gm15547-201ENSMUST00000122152 333 ntBASIC14.15□□□□□ -0.14
Atp2a1Q8R429 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Gm25043-201ENSMUST00000158604 212 ntBASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.15□□□□□ -0.14
Atp2a1Q8R429 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Gm45186-201ENSMUST00000206874 478 ntBASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atp2a1Q8R429 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.14□□□□□ -0.15
Atp2a1Q8R429 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atp2a1Q8R429 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.13□□□□□ -0.15
Atp2a1Q8R429 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atp2a1Q8R429 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atp2a1Q8R429 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atp2a1Q8R429 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atp2a1Q8R429 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Atp2a1Q8R429 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms