Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp7Q8R1T1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Gm8959-201ENSMUST00000213150 571 ntBASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Chmp7Q8R1T1 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Chmp7Q8R1T1 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Gm27627-201ENSMUST00000183644 150 ntBASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp7Q8R1T1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Gm18626-201ENSMUST00000221512 1409 ntBASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Gm20426-201ENSMUST00000173657 440 ntBASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.13■□□□□ 0.17
Chmp7Q8R1T1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Gm22334-201ENSMUST00000158070 133 ntBASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms