Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 AC169036.1-201ENSMUST00000227994 296 ntBASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Gm6430-201ENSMUST00000054664 1248 ntBASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ddx54Q8K4L0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ddx54Q8K4L0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ddx54Q8K4L0 Gm7278-201ENSMUST00000119836 1401 ntBASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Gm12948-201ENSMUST00000119406 682 ntBASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Gm9645-201ENSMUST00000197131 792 ntBASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Gm43520-201ENSMUST00000197996 164 ntBASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Gm42657-201ENSMUST00000201746 211 ntBASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Gm44980-201ENSMUST00000205826 314 ntBASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 AC153954.1-201ENSMUST00000216959 255 ntBASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 AC140375.1-201ENSMUST00000225421 694 ntBASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx54Q8K4L0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm11509-201ENSMUST00000117358 325 ntBASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm16071-201ENSMUST00000119589 793 ntBASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm28686-201ENSMUST00000187404 609 ntBASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm17826-201ENSMUST00000189720 798 ntBASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm4157-201ENSMUST00000211647 679 ntBASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Olfr1347-205ENSMUST00000220413 964 ntBASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Gm25201-201ENSMUST00000083093 170 ntBASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx54Q8K4L0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms