Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Gm23931-201ENSMUST00000103842 109 ntBASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Gm14921-201ENSMUST00000118643 908 ntBASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Gm37424-201ENSMUST00000191727 561 ntBASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Gm32025-201ENSMUST00000217960 307 ntBASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rfwd3Q8CIK8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms