Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm44967-201ENSMUST00000207047 631 ntBASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Gm13097-201ENSMUST00000210722 397 ntBASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Rdh1Q8CGV4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm12314-201ENSMUST00000118104 538 ntBASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm24845-201ENSMUST00000158034 109 ntBASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm2383-201ENSMUST00000181461 807 ntBASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm29199-201ENSMUST00000187766 775 ntBASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm38317-201ENSMUST00000195564 343 ntBASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm10076-201ENSMUST00000073238 384 ntBASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Mir433-201ENSMUST00000093564 124 ntBASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rdh1Q8CGV4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rdh1Q8CGV4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rdh1Q8CGV4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rdh1Q8CGV4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rdh1Q8CGV4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rdh1Q8CGV4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Gm14832-201ENSMUST00000121289 322 ntBASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Gm8885-201ENSMUST00000189382 598 ntBASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 AA914427-201ENSMUST00000193194 1166 ntBASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.27□□□□□ -0.45
Rdh1Q8CGV4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 123.7 ms