Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim52Q8CDV4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Gm11331-201ENSMUST00000119764 288 ntBASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Gm22902-201ENSMUST00000158488 302 ntBASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Gm43378-201ENSMUST00000199336 582 ntBASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim52Q8CDV4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Gm6039-201ENSMUST00000121667 1250 ntBASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Gm43947-201ENSMUST00000203019 959 ntBASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim52Q8CDV4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trim52Q8CDV4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trim52Q8CDV4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trim52Q8CDV4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim52Q8CDV4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim52Q8CDV4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim52Q8CDV4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Gm20426-201ENSMUST00000173657 440 ntBASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Gm28071-201ENSMUST00000190355 478 ntBASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trim52Q8CDV4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trim52Q8CDV4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms