Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Gm11930-201ENSMUST00000117788 190 ntBASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Gm14017-201ENSMUST00000121934 386 ntBASIC14.03□□□□□ -0.16
Usp20Q8C6M1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Gm18753-201ENSMUST00000201000 566 ntBASIC14.03□□□□□ -0.16
Usp20Q8C6M1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Mir339-201ENSMUST00000083659 96 ntBASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.03□□□□□ -0.16
Usp20Q8C6M1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp20Q8C6M1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp20Q8C6M1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp20Q8C6M1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp20Q8C6M1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp20Q8C6M1 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.02□□□□□ -0.16
Usp20Q8C6M1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp20Q8C6M1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.02□□□□□ -0.16
Usp20Q8C6M1 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.02□□□□□ -0.16
Usp20Q8C6M1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp20Q8C6M1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp20Q8C6M1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp20Q8C6M1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Usp20Q8C6M1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp20Q8C6M1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Gm12058-201ENSMUST00000118614 437 ntBASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Gm15547-201ENSMUST00000122152 333 ntBASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Gm15276-201ENSMUST00000145953 498 ntBASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Gm27046-201ENSMUST00000182160 463 ntBASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Gm44882-201ENSMUST00000205702 802 ntBASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Gm13097-201ENSMUST00000210722 397 ntBASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Gm8712-201ENSMUST00000221090 701 ntBASIC14.02□□□□□ -0.17
Usp20Q8C6M1 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Pck2-205ENSMUST00000226352 2784 ntBASIC14.02□□□□□ -0.17
Usp20Q8C6M1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp20Q8C6M1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Gm12291-201ENSMUST00000121627 311 ntBASIC14.01□□□□□ -0.17
Usp20Q8C6M1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Gm37102-201ENSMUST00000195740 1105 ntBASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp20Q8C6M1 Gm45925-201ENSMUST00000218882 744 ntBASIC14.01□□□□□ -0.17
Usp20Q8C6M1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms