Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Gm15376-201ENSMUST00000122258 783 ntBASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Gm26315-201ENSMUST00000083890 321 ntBASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Slc5a7Q8BGY9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Slc5a7Q8BGY9 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Slc5a7Q8BGY9 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms