Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trnp1Q80ZI1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Gm24231-201ENSMUST00000104315 133 ntBASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Gm4726-201ENSMUST00000135604 736 ntBASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Gm6019-201ENSMUST00000148369 736 ntBASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Gm22144-201ENSMUST00000157402 102 ntBASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Gm2517-201ENSMUST00000215651 348 ntBASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trnp1Q80ZI1 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trnp1Q80ZI1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trnp1Q80ZI1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trnp1Q80ZI1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trnp1Q80ZI1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.14□□□□□ -0.15
Trnp1Q80ZI1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.14□□□□□ -0.15
Trnp1Q80ZI1 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.14□□□□□ -0.15
Trnp1Q80ZI1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trnp1Q80ZI1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trnp1Q80ZI1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trnp1Q80ZI1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trnp1Q80ZI1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.14□□□□□ -0.15
Trnp1Q80ZI1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trnp1Q80ZI1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trnp1Q80ZI1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms