Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Gm24136-201ENSMUST00000083374 165 ntBASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.64□□□□□ -0.39
Rpp38Q80UU2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Mir1247-201ENSMUST00000116706 82 ntBASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Gm12314-201ENSMUST00000118104 538 ntBASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.63□□□□□ -0.39
Rpp38Q80UU2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Mir7085-201ENSMUST00000184353 66 ntBASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Gm18304-201ENSMUST00000189162 546 ntBASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.63□□□□□ -0.39
Rpp38Q80UU2 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpp38Q80UU2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.62□□□□□ -0.39
Rpp38Q80UU2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Gm13316-201ENSMUST00000140537 691 ntBASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Gm27243-201ENSMUST00000183964 521 ntBASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.62□□□□□ -0.39
Rpp38Q80UU2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rpp38Q80UU2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms