Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Gm4857-201ENSMUST00000192718 785 ntBASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdh19Q80TF3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gm22323-201ENSMUST00000103832 109 ntBASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gm17376-201ENSMUST00000166016 84 ntBASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gm8018-201ENSMUST00000173536 789 ntBASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh19Q80TF3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Gm11531-201ENSMUST00000117614 555 ntBASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Gm15547-201ENSMUST00000122152 333 ntBASIC12.42□□□□□ -0.42
Pcdh19Q80TF3 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms