Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
ShbQ6PD21 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ShbQ6PD21 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Gm25076-201ENSMUST00000104098 132 ntBASIC13.5□□□□□ -0.25
ShbQ6PD21 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.5□□□□□ -0.25
ShbQ6PD21 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.5□□□□□ -0.25
ShbQ6PD21 Gm15744-201ENSMUST00000161734 213 ntBASIC13.5□□□□□ -0.25
ShbQ6PD21 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Gm3551-201ENSMUST00000190750 664 ntBASIC13.5□□□□□ -0.25
ShbQ6PD21 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.5□□□□□ -0.25
ShbQ6PD21 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ShbQ6PD21 Gm18463-201ENSMUST00000207258 474 ntBASIC13.5□□□□□ -0.25
ShbQ6PD21 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.5□□□□□ -0.25
ShbQ6PD21 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.5□□□□□ -0.25
ShbQ6PD21 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ShbQ6PD21 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
ShbQ6PD21 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ShbQ6PD21 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.49□□□□□ -0.25
ShbQ6PD21 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ShbQ6PD21 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Gm25063-201ENSMUST00000104666 94 ntBASIC13.49□□□□□ -0.25
ShbQ6PD21 Gm14942-201ENSMUST00000119642 336 ntBASIC13.49□□□□□ -0.25
ShbQ6PD21 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.49□□□□□ -0.25
ShbQ6PD21 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.49□□□□□ -0.25
ShbQ6PD21 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ShbQ6PD21 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.49□□□□□ -0.25
ShbQ6PD21 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.49□□□□□ -0.25
ShbQ6PD21 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.49□□□□□ -0.25
ShbQ6PD21 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.49□□□□□ -0.25
ShbQ6PD21 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.49□□□□□ -0.25
ShbQ6PD21 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.49□□□□□ -0.25
ShbQ6PD21 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ShbQ6PD21 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.48□□□□□ -0.25
ShbQ6PD21 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.48□□□□□ -0.25
ShbQ6PD21 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.48□□□□□ -0.25
ShbQ6PD21 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.48□□□□□ -0.25
ShbQ6PD21 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Gm18367-201ENSMUST00000176139 600 ntBASIC13.48□□□□□ -0.25
ShbQ6PD21 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.48□□□□□ -0.25
ShbQ6PD21 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.48□□□□□ -0.25
ShbQ6PD21 Gm8956-201ENSMUST00000203939 825 ntBASIC13.48□□□□□ -0.25
ShbQ6PD21 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.48□□□□□ -0.25
ShbQ6PD21 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
ShbQ6PD21 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.48□□□□□ -0.25
ShbQ6PD21 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
ShbQ6PD21 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShbQ6PD21 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ShbQ6PD21 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms