Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Gm38228-201ENSMUST00000193169 1293 ntBASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Gm19091-201ENSMUST00000208120 978 ntBASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slx4Q6P1D7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Gm38346-201ENSMUST00000192379 2639 ntBASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Gm13916-201ENSMUST00000117368 628 ntBASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Gm25545-201ENSMUST00000122673 323 ntBASIC19.11■□□□□ 0.65
Slx4Q6P1D7 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Gm45120-201ENSMUST00000208880 408 ntBASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Gm45575-201ENSMUST00000210283 548 ntBASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slx4Q6P1D7 Gm12990-201ENSMUST00000120372 468 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm12516-201ENSMUST00000120819 385 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm10371-202ENSMUST00000228010 1081 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm6430-201ENSMUST00000054664 1248 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm5705-201ENSMUST00000066241 711 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm6198-201ENSMUST00000191337 2929 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm9361-201ENSMUST00000198695 1507 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm25076-201ENSMUST00000104098 132 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm11801-201ENSMUST00000117807 746 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm13600-201ENSMUST00000117949 744 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm28686-201ENSMUST00000187404 609 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm5100-201ENSMUST00000195631 589 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Gm19009-201ENSMUST00000223072 823 ntBASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slx4Q6P1D7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slx4Q6P1D7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms